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In-Silico PrPSc inhibitor screening of 60,000 commercially available compounds
Authors: NS Pagadala, R Perez-Pineiro, TC Bjorndahl, RK Saini, C Ladner, ...
Year: 2013
Journal/Conference: PRION
Citations: 0
Categories: Bioinformatics and Web Services Prion Research
A simple method to measure protein side-chain mobility using NMR chemical shifts.
Authors: Berjanskii MV; Wishart DS
Year: 2013
Journal/Conference: Journal of the American Chemical Society
Citations: 40
Exploring the essential collective dynamics of interacting proteins: application to prion protein dimers
Authors: BB Issack, M Berjanskii, DS Wishart, M Stepanova
Year: 2012
Journal/Conference: Proteins: Structure, Function, and Bioinformatics 80 (7)-
Citations: 24
Categories: Proteins
Solution NMR of a 463-residue phosphohexomutase: domain 4 mobility, substates, and phosphoryl transfer defect
Authors: AVS Sarma, A Anbanandam, A Kelm, R Mehra-Chaudhary, Y Wei, P Qin, ...
Year: 2012
Journal/Conference: Biochemistry 51 (3), 807-819
Citations: 25
Categories: NMR Spectroscopy NMR Technology Biomolecular NMR
Comparative analysis of prion proteins for evolutionarily diverse vertebrate species, polymorphic variants and mutants-Structure and essential dynamics
Authors: M Stepanova, B Issack, K Santo, T Fito, M Berjanskii, D Wishart
Year: 2012
Journal/Conference: PRION
Citations: 0
Categories: Proteins
Resolution-by-proxy: a simple measure for assessing and comparing the overall quality of NMR protein structures
Authors: M Berjanskii, J Zhou, Y Liang, G Lin, DS Wishart
Year: 2012
Journal/Conference: Journal of biomolecular NMR 53, 167-180
Citations: 75
Use of proteinase K nonspecific digestion for selective and comprehensive identification of interpeptide cross-links: application to prion proteins
Authors: EV Petrotchenko, JJ Serpa, DB Hardie, M Berjanskii, BP Suriyamongkol, ...
Year: 2012
Journal/Conference: Molecular & Cellular Proteomics 11 (7), M111.24-1-M111.24-13
Citations: 63
Categories: Proteins
Comparative analysis of essential collective dynamics and NMR-derived flexibility profiles in evolutionarily diverse prion proteins
Authors: KP Santo, M Berjanskii, DS Wishart, M Stepanova
Year: 2011
Journal/Conference: Prion 5 (3), 188-200
Citations: 26
Categories: Proteins Flexibility
Exploring the Conformational Dynamics of Prion Proteins to Understand the Mechanism of Susceptibility/Resistance to Pathological Conversion
Authors: BB Issack, KP Santo, T Fito, M Berjanskii, DS Wishart, M Stepanova
Year: 2011
Journal/Conference: PRION
Citations: 0
Categories: Proteins
The prion protein binds thiamine
Authors: R Perez‐Pineiro, TC Bjorndahl, MV Berjanskii, D Hau, L Li, A Huang, ...
Year: 2011
Journal/Conference: The FEBS journal 278 (21)-
Citations: 46
PROSESS: a protein structure evaluation suite and server
Authors: M Berjanskii, Y Liang, J Zhou, P Tang, P Stothard, Y Zhou, J Cruz, ...
Year: 2010
Journal/Conference: Nucleic acids research 38 (suppl_2), W633-W640
Citations: 110
Categories: Protein Structure
Probing Prion Interactions with Small Molecule Human Metabolites
Authors: R Perez-Pineiro, TC Bjorndahl, YW Dong, V Mark, DS Wishart
Year: 2010
Journal/Conference: PRION
Citations: 0
Categories: Metabolomics Prion Research Metabolome
GeNMR: a web server for rapid NMR-based protein structure determination
Authors: M Berjanskii, P Tang, J Liang, JA Cruz, J Zhou, Y Zhou, E Bassett, ...
Year: 2009
Journal/Conference: Nucleic acids research 37 (suppl_2), W670-W677
Citations: 0
Categories: Protein Structure
Structural domains and main-chain flexibility in prion proteins.
Authors: Blinov N; Berjanskii M; Wishart DS; Stepanova M
Year: 2009
Journal/Conference: Biochemistry
Citations: 58
PROTEUS2: a web server for comprehensive protein structure prediction and structure-based annotation
Authors: S Montgomerie, JA Cruz, S Shrivastava, D Arndt, M Berjanskii, DS Wishart
Year: 2008
Journal/Conference: Nucleic acids research 36 (suppl_2), W202-W209
Citations: 0
Categories: Protein Structure Prediction
CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data
Authors: DS Wishart, D Arndt, M Berjanskii, P Tang, J Zhou, G Lin
Year: 2008
Journal/Conference: Nucleic acids research 36 (suppl_2), W496-W502
Citations: 233
Categories: Protein Structure Chemical Shifts
Application of the random coil index to studying protein flexibility
Authors: MV Berjanskii, DS Wishart
Year: 2008
Journal/Conference: Journal of biomolecular NMR 40, 31-48
Citations: 147
Categories: Flexibility
PPT-DB: the protein property prediction and testing database
Authors: DS Wishart, D Arndt, M Berjanskii, AC Guo, Y Shi, S Shrivastava, J Zhou, ...
Year: 2007
Journal/Conference: Nucleic Acids Research 36 (suppl_1), D222-D229
Citations: 24
Categories: Prediction
The RCI server: rapid and accurate calculation of protein flexibility using chemical shifts
Authors: MV Berjanskii, DS Wishart
Year: 2007
Journal/Conference: Nucleic acids research 35 (suppl_2), W531-W537
Citations: 91
Categories: Chemical Shifts Flexibility
Accurate prediction of protein torsion angles using chemical shifts and sequence homology
Authors: S Neal, M Berjanskii, H Zhang, DS Wishart
Year: 2006
Journal/Conference: Magnetic Resonance in Chemistry 44 (S1), S158-S167
Citations: 60
Categories: Chemical Shifts Prediction