Publications in Protein Structure View Category Details

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#42

Rapid and reliable protein structure determination via chemical shift threading

Authors: NE Hafsa, MV Berjanskii, D Arndt, DS Wishart

Year: 2018

Journal/Conference: Journal of Biomolecular NMR 70, 33-51

Citations: 6

Categories: Protein Structure Chemical

More details Google Scholar Pubmed
#66

Interaction of a diazirine modified curcumin analog with the beta-oligomeric form of the Syrian hamster prion protein

Authors: R Perez-Pineiro, TC Bjorndahl, M Berjanskii, C Ladner, NS Pagadala, ...

Year: 2013

Journal/Conference: PRION

Citations: 0

Categories: Protein Structure Prion Research Proteins Protein Conformation Protein Dynamics Protein Folding

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#50

Binding of epigallocatechin gallate to monomeric, oligomeric and fibril forms of the syrian hamster prion protein

Authors: TC Bjorndahl, R Perez-Pineiro, RK Saini, C Ladner, NS Pagadala, ...

Year: 2013

Journal/Conference: PRION 7, 83-83

Citations: 0

Categories: Protein Structure Prion Research Proteins Protein Conformation Protein Dynamics Protein Folding

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#64

A simple method to measure protein side-chain mobility using NMR chemical shifts.

Authors: Berjanskii MV; Wishart DS

Year: 2013

Journal/Conference: Journal of the American Chemical Society

Citations: 40

Categories: Protein Structure and Dynamics NMR Spectroscopy Protein Structure Chemical Shifts Proteins Protein Conformation Nuclear Magnetic Resonance, Biomolecular Biomolecular NMR

More details Google Scholar Pubmed: 24032347 DOI: 10.1021/ja407509z
#20

Resolution-by-proxy: a simple measure for assessing and comparing the overall quality of NMR protein structures

Authors: M Berjanskii, J Zhou, Y Liang, G Lin, DS Wishart

Year: 2012

Journal/Conference: Journal of biomolecular NMR 53, 167-180

Citations: 75

Categories: NMR Spectroscopy Structural Biology Protein Structure NMR Technology Proteins Protein Conformation Biomolecular NMR Protein Dynamics Protein Folding Structural Bioinformatics

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#62

The prion protein binds thiamine

Authors: R Perez‐Pineiro, TC Bjorndahl, MV Berjanskii, D Hau, L Li, A Huang, ...

Year: 2011

Journal/Conference: The FEBS journal 278 (21)-

Citations: 46

Categories: Protein Structure Prion Research Proteins Protein Conformation Protein Dynamics Protein Folding

More details Google Scholar Pubmed DOI: 10.1111/j.1742-4658.2011.08304.x
#16

PROSESS: a protein structure evaluation suite and server

Authors: M Berjanskii, Y Liang, J Zhou, P Tang, P Stothard, Y Zhou, J Cruz, ...

Year: 2010

Journal/Conference: Nucleic acids research 38 (suppl_2), W633-W640

Citations: 110

Categories: Protein Structure

More details Google Scholar Pubmed DOI: 10.1093/nar/W633/1104830
#21

GeNMR: a web server for rapid NMR-based protein structure determination

Authors: M Berjanskii, P Tang, J Liang, JA Cruz, J Zhou, Y Zhou, E Bassett, ...

Year: 2009

Journal/Conference: Nucleic acids research 37 (suppl_2), W670-W677

Citations: 0

Categories: Protein Structure

More details Google Scholar Pubmed DOI: 10.1093/nar/W670/1126378
#60

Structural domains and main-chain flexibility in prion proteins.

Authors: Blinov N; Berjanskii M; Wishart DS; Stepanova M

Year: 2009

Journal/Conference: Biochemistry

Citations: 58

Categories: Protein Structure and Dynamics NMR Spectroscopy Protein Structure Prion Research Proteins Flexibility Protein Conformation Models, Molecular Nuclear Magnetic Resonance, Biomolecular Molecular Modeling Biomolecular NMR

More details Google Scholar Pubmed: 19178154 DOI: 10.1021/bi802043h
#12

CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data

Authors: DS Wishart, D Arndt, M Berjanskii, P Tang, J Zhou, G Lin

Year: 2008

Journal/Conference: Nucleic acids research 36 (suppl_2), W496-W502

Citations: 233

Categories: Protein Structure Chemical Shifts

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#15

PROTEUS2: a web server for comprehensive protein structure prediction and structure-based annotation

Authors: S Montgomerie, JA Cruz, S Shrivastava, D Arndt, M Berjanskii, DS Wishart

Year: 2008

Journal/Conference: Nucleic acids research 36 (suppl_2), W202-W209

Citations: 0

Categories: Protein Structure Prediction

More details Google Scholar Pubmed DOI: 10.1093/nar/W202/2506231
#11

PREDITOR: a web server for predicting protein torsion angle restraints

Authors: MV Berjanskii, S Neal, DS Wishart

Year: 2006

Journal/Conference: Nucleic acids research 34 (suppl_2), W63-W69

Citations: 0

Categories: Bioinformatics and Web Services Protein Structure Proteins Protein Conformation Protein Dynamics Protein Folding

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#57

A simple method to predict protein flexibility using secondary chemical shifts.

Authors: Berjanskii MV; Wishart DS

Year: 2005

Journal/Conference: Journal of the American Chemical Society

Citations: 497

Categories: Protein Structure and Dynamics NMR Spectroscopy Protein Structure Chemical Shifts Proteins Flexibility Protein Conformation Protein Dynamics

More details Google Scholar Pubmed: 16248604 DOI: 10.1021/ja054842f
#47

PROTEIN STRUCTURE AND FOLDING-NMR structure of the N-terminal J domain of murine polyomavirus T antigens. Implications for DnaJ-like domains and for mutations of T antigens.

Authors: MV Berjanskii, MI Riley, A Xie, V Semenchenko, WR Folk, SRV Doren

Year: 2000

Journal/Conference: Journal of Biological Chemistry 275 (46)4-3

Citations: 1

Categories: Protein Structure Antigens

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#59

TIMP-1 contact sites and perturbations of stromelysin 1 mapped by NMR and a paramagnetic surface probe.

Authors: Arumugam S; Hemme CL; Yoshida N; Suzuki K; Nagase H; Berjanskii M; Wu B; Van Doren SR

Year: 1998

Journal/Conference: Biochemistry

Citations: 62

Categories: NMR Spectroscopy Protein Structure Proteins Proteins/*chemistry Models, Molecular Nuclear Magnetic Resonance, Biomolecular Proteomics Molecular Modeling Biomolecular NMR

More details Google Scholar Pubmed: 9657677 DOI: 10.1021/bi980128h